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Research Infrastructure Registry in Cyprus
HomeResearch Infrastructures Database  /  Biological and Medical Sciences  /  Biological/Biomedical Engineering and Biotechnology/Nanotechnology Research Facilities  /  The Cyprus Institute of Neurology & Genetics (Department of Molecular Genetics Thalassaemia (MGTD))

The Cyprus Institute of Neurology & Genetics (Department of Molecular Genetics Thalassaemia (MGTD))

GENERAL INFORMATION

Description and purpose of the Research Infrastructure
Mission: To identify and resolve current and emerging needs in diagnosis, therapy, research, education and knowledge infrastructure, in order to benefit society at large, and carrier and patient communities of thalassemias and other rare disorders in Cyprus in particular. Description & Objectives: Established to become a leading reference lab for thalassaemia in Cyprus, the Molecular Genetics Thalassaemia Department (MGTD) at CING is dedicated to excellence. It has built a global reputation for its outstanding services, research, and education. Providing genetic testing for variant detection and characterisation of hemoglobinopathies, the MGTD innovates diagnosis across monogenic diseases, as the national reference centre for their preimplantation genetic testing (PGT-M) and non-invasive prenatal testing (NIPT). Uniquely placed by combining clinical haematology services with exceptional molecular analysis expertise and equipment, the MGTD medical and diagnostic staff are dedicated to advancing and communicating precision diagnostics, and to offering personalized patient care and advice. MGTD research focuses on pioneering diagnostics and therapeutics for red blood cell disorders. To innovate treatments, the MGTD employs cutting-edge genome manipulation by gene addition and editing, in transgenic cell lines, stem cells and immunodeficient mice as surgical models. The MGTD implements patient registries for rare blood disorders, leads a large-scale, multi-ethnic genome-wide association study of genetic modifiers for hemoglobinopathies, and runs the world-leading database platform for non-malignant blood disorders, the ITHANET Portal. Committed to knowledge creation, education and alleviating the global haemoglobinopathy burden via data-driven healthcare, the MGTD is program partner and host for training of health professionals and leads the ClinGen-recognised Hemoglobinopathy Variant Curation Expert Panel.

USEFUL FIGURES

Personnel

13

Personnel

Male

38%

Male

Female

62%

Female

Publications

104

Publications

ACCESS TO INFRASTRUCTURE

  • Academia
  • Industry
  • Public

CONTACT INFO

INFORMATION OF INSTRUMENTATION OPERATING IN THE INFRASTRUCTURE

[BD Biosciences] FACS Aria III Flow Cytometry Cell Sorter
  • Name:  [BD Biosciences] FACS Aria III Flow Cytometry Cell Sorter
  • Description:  The BD FACSAria III Sorter enables high-performance analysis and high-performance sorting at exceptional optical detection sensitivity with fixed alignment of the cuvette flow cells. System with BD FACSDiva Software, 3 lasers (355 nm >15 mW, 488 nm >20 mW, 633 nm >18 mW), 10 fluorescence channels, 3 nozzle sizes (80, 100, 120 nm), 2-4-way sorting and plate-based single-cell sorting. Access through trained CING staff.
  • Units:  1
  • Hosting Laboratory / Department:  Molecular Genetics Thalassaemia
Brief description of the utilization of the instrument:
Flow cytometry cell sorting into up to four populations (plus waste) or into plates.
Year:  2021
Funding Source: 
  • EU

Available for access
by external users

[MindRay] BC-720
  • Name:  [MindRay] BC-720
  • Description:  WBC: [White blood cell count WBC; Basophil count Bas#; Basophil percentage Bas%; Neutrophil count Neu#; Neutrophil percentage Neu%; Eosinophil count Eos#; Eosinophil percentage Eos%; Lymphocyte count Lym#; Lymphocyte percentage Lym%; Monocyte count Mon#; Monocyte percentage Mon%; Immature granulocyte count IMG#; Immature granulocyte percentage IMG%]; RET: [Reticulocyte percentage RET%; Reticulocyte count RET#; Reticulocyte hemoglobin expression RHE; Immature reticulocyte fraction IRF; Low fluorescent ratio LFR; Middle fluorescent ratio MFR; High fluorescent ratio HFR]; RBC: [Red blood cell count RBC; Hemoglobin concentration HGB; Mean corpuscular volume MCV; Mean corpuscular hemoglobin MCH; Mean corpuscular hemoglobin concentration MCHC; Red blood cell distribution width coefficient of variation RDW-CV; Red blood cell distribution width standard deviation RDW-SD; Hematocrit HCT; Nucleated red blood cell count NRBC#; Nucleated red blood cell percentage NRBC%]; Platelet: [Platelet count PLT; Mean platelet volume MPV; Platelet distribution width PDW; Plateletcrit PCT; Platelet-large cell ratio P-LCR; Platelet-large cell count P-LCC; Immature platelet fraction IPF; Platelet count- impedance PLT-I; Platelet count hybrid PLT-H; Optical platelet count PLT-O]; ESR: [Erythrocyte sedimentation rate ESR]Access through trained CING staff.
  • Units:  1
  • Hosting Laboratory / Department:  Molecular Genetics Thalassaemia
Brief description of the utilization of the instrument:
Comprehensive haematology analysis, including enumeration of nucleated and immature red blood cell populations and measurement of erythrocyte sedimentation rate.
Year:  2024
Funding Source: 
  • Own

Available for access
by external users

[Sysmex/Partec] CyFlow Cube 6 Flow Cytometer
  • Name:  [Sysmex/Partec] CyFlow Cube 6 Flow Cytometer
  • Description:  Compact, low-noise benchtop flow cytometer for the analysis of individual cells and microscopic particles, equipped with 1 laser (488 nm) and 3 fluorescence channels (FITC, PE, PerCP). Simple CyFlow software for control, data acquisition, analysis and storage, and True Volumetric Absolute Counting (TVAC) for volumetry without addition of control particles. Initial access through trained CING staff.
  • Units:  1
  • Hosting Laboratory / Department:  Molecular Genetics Thalassaemia
Brief description of the utilization of the instrument:
Analytical flow cytometry for fluorochromes with 488-nm excitation.
Year:  2011
Funding Source: 
  • Own

Available for access
by external users

[Tharmac] Cytocentrifuge CellSpin II
  • Name:  [Tharmac] Cytocentrifuge CellSpin II
  • Description:  Robust CellSpin II system based on Hettich Universal 320 centrifuge for controlled deposition of cultured cells on up to 12 microscopy slides per run (for `Cytospin`™ protocols). Access through trained CING personnel.
  • Units:  1
  • Hosting Laboratory / Department:  Molecular Genetics Thalassaemia
Brief description of the utilization of the instrument:
Robust `Cytospin`™ system for subsequent staining and microscopic characterisation of cell populations.
Year:  2012
Funding Source: 
  • EU

Available for access
by external users

[Vilber Lourmat] Fusion FX7 Edge V.070 Spectra 7 Channel Flat Bed Imager
  • Name:  [Vilber Lourmat] Fusion FX7 Edge V.070 Spectra 7 Channel Flat Bed Imager
  • Description:  Fully specked Fusion-FX7.Edge with high-sensitivity ARQ-9 CCD camera: 4.6 megapixels / -65°C absolute cooling, proprietary V.070 Motorized Lens (24mm). FOV: 22x22cm, CN-800 darkroom with swappable epi white light, motorized filter wheel with 7 positions, color imaging, laser positioning system, Evolution-Capt Software, 7 Spectra Capsules (C640, C530, C480, C440, C740, C780, C680), 5 optical filters (F-565, F595 Y3, F-695 Y5, F-750, F-850). Access through trained CING staff.
  • Units:  1
  • Hosting Laboratory / Department:  Molecular Genetics Thalassaemia
Brief description of the utilization of the instrument:
High-sensitivity, multiplex blot and gel imager for chemiluminescence, brightfield and fluorescence imaging.
Year:  2021
Funding Source: 
  • EU

Available for access
by external users

[Shimadzu] Prominence HPLC System
  • Name:  [Shimadzu] Prominence HPLC System
  • Description:  Modular low-pressure gradient HPLC system with high-sensitivity PDA measurement of 190 nm to 800 nm absorbance and gradients of up to for liquid phases. Established RP-HPLC and CE-HPLC protocols and autosamples for up to 70 samples. Modules: System Controller CBM-20A, Solvent Delivery Unit LC-20AD, CTO-20AC, Column Oven CTO-20A, Photo-diode array detector SPD-M20A, Online degassing unit DGU-20A, Fraction collector FRC-10A. Access through trained CING staff.
  • Units:  1
  • Hosting Laboratory / Department:  Molecular Genetics Thalassaemia
Brief description of the utilization of the instrument:
HPLC system for chromatographic characterisation of analytes. Current use is the fast, automatic analysis of blood and cell samples for haemoglobins and globins.
Year:  2007
Funding Source: 
  • Own

Available for access
by external users

[Qiagen] QIAcuity 5-plex digital PCR System
  • Name:  [Qiagen] QIAcuity 5-plex digital PCR System
  • Description:  Fully integrated plate-based digital PCR system for single-plate runs with advanced 5plex multiplexing, high sensitivity comprehensive results for 24 plates at 26k partitions each, in approx. 2 hours.
  • Units:  1
  • Hosting Laboratory / Department:  Molecular Genetics Thalassaemia
Brief description of the utilization of the instrument:
All-in-one easy-to-use digital PCR system for up to 5plex (incl. calibrator), sensitive, accurate and robust quantification of nucleic acid subpopulations, including for mtuation detection, vector titration and measurement of differential expression.
Year:  0000
Funding Source: 
  • Own

Available for access
by external users

[Olympus] IX73PIF Inverted Microscope
  • Name:  [Olympus] IX73PIF Inverted Microscope
  • Description:  Inverted Microscope with automatic multiple-channel acquisition (based on manual filter selection), with 3 lenses (10x UPlan FL N, 20x LucPlan FL N, 40x LucPlan FL N), 4 fluorescence channels, U-LEDPS and U-HGLGPS light sources, automatic X/Y stage, Olympus LC35 camera, CellSense software. Access through qualified CING personnel within the BSL2 cell culture facility.
  • Units:  1
  • Hosting Laboratory / Department:  Molecular Genetics Thalassaemia
Brief description of the utilization of the instrument:
Brightfield and fluorescence imaging of live and fixed cells and samples.
Year:  2015
Funding Source: 
  • Own

Available for access
by external users

[ABI] ABI Q5 Real-time Quantitative PCR System
  • Name:  [ABI] ABI Q5 Real-time Quantitative PCR System
  • Description:  5-channel, white LED real-time PCR System with superior performance, maximum dye versatility in a compact benchtop design and 21 CFR Part 11 compliance. Initial access through trained CING staff.
  • Units:  1
  • Hosting Laboratory / Department:  Molecular Genetics Thalassaemia
Brief description of the utilization of the instrument:
Real-time PCR protocols with up to 5plex detection
Year:  2012
Funding Source: 
  • Own

Available for access
by external users

[LONZA] Nucleofector 4D (Core Unit & X Module)
  • Name:  [LONZA] Nucleofector 4D (Core Unit & X Module)
  • Description:  Pre-set protocols and reagents optimized by the manufacturer for a large range of cell lines allow high-efficiency (99%) transfection with nucleic acids at high viability (>95%) of cell lines and primary cells. Systems with the core control unit and the standard nucleofection X unit for detached cells in 100 μL cuvettes. Protocols established on site allow RNA, RNP or plasmid-based nucleofection of gene editing tools and plasmids at high efficiency, with best results for hematogpoietic stem cells and RNPs, at >95% efficiency and viability. Access through trained CING staff.
  • Units:  2
  • Hosting Laboratory / Department:  Molecular Genetics Thalassaemia
Brief description of the utilization of the instrument:
Highest-performance, highest-viability electroporation for transfection and/or editing of cell lines and primary cells.
Year:  2022
Funding Source: 
  • EU

Available for access
by external users